Multicenter assessment of shotgun metagenomics for pathogen detection - eBioMedicine
Genes | Free Full-Text | Comparison of Metagenomics and Metatranscriptomics Tools: A Guide to Making the Right Choice
Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen | Nature Communications
Metagenomic next-generation sequencing to identify pathogens and cancer in lung biopsy tissue - eBioMedicine
Taxonomic Profiling of Metagenomics Samples with Seven Bridges
TAMA: improved metagenomic sequence classification through meta-analysis | BMC Bioinformatics | Full Text
Centrifuge: rapid and sensitive classification of metagenomic sequences | bioRxiv
Generic diversity identified by Centrifuge, Kraken, and MegaBLAST in... | Download Scientific Diagram
6. Taxonomic investigation — Genomics Tutorial 2020.2.0 documentation
Recentrifuge: Robust comparative analysis and contamination removal for metagenomics | PLOS Computational Biology
Frontiers | Metagenomic Data Assembly – The Way of Decoding Unknown Microorganisms
CCMetagen: comprehensive and accurate identification of eukaryotes and prokaryotes in metagenomic data | Genome Biology | Full Text
Frontiers | Machine Learning and Deep Learning Applications in Metagenomic Taxonomy and Functional Annotation
A streamlined clinical metagenomic sequencing protocol for rapid pathogen identification | Scientific Reports
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples | Environmental Microbiome | Full Text
Frontiers | Fast and Accurate Classification of Meta-Genomics Long Reads With deSAMBA
Analysis of Metagenomic Data - YouTube
GitHub - DaehwanKimLab/centrifuge: Classifier for metagenomic sequences
Centrifuge+: improving metagenomic analysis upon Centrifuge : r/BiologyPreprints
CosmosID-HUB: An Interactive Metagenomics Analysis Platform with Increased Accuracy and Precision at the Strain Level - CosmosID
Frontiers | Metagenomic Analysis Revealed Differences in Composition and Function Between Liquid-Associated and Solid-Associated Microorganisms of Sheep Rumen
Genes | Free Full-Text | Exploring Semi-Quantitative Metagenomic Studies Using Oxford Nanopore Sequencing: A Computational and Experimental Protocol
The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples | Environmental Microbiome | Full Text
Overview of mini-metagenome and bulk metagenome approaches used in this... | Download Scientific Diagram
Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection | Nature Biotechnology
